Updated server side stuff to work with new yepnope which makes things much simpler.

src/Umbraco.Web/UI/JavaScript/JsInitialize.js

@@ -0,0 +1,18 @@
+[
+    'lib/jquery/jquery-1.8.2.min.js',
+    'lib/jquery/jquery.cookie.js',
+    'lib/angular/angular.min.js',
+    'lib/bootstrap/js/bootstrap.js',
+    'lib/underscore/underscore.js',
+    'lib/umbraco/Extensions.js',
+
+    'js/app.js',
+
+    'js/umbraco.resources.js',
+    'js/umbraco.directives.js',
+    'js/umbraco.filters.js',
+    'js/umbraco.services.js',
+    'js/umbraco.security.js',
+    'js/umbraco.controllers.js',
+    'js/routes.js'
+]